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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003072.1_3000_3875_F

Intron Information:

Intron Rank:

147867

Intron Class:

major

Intron Phase:

Intron Coordinates:

3000 - 3875

Intron Length:

876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTGGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

58.3

46.6

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

31.2

-2.2

3.4

46.1

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029604

Chromosome:

PEDO01003072.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045377

2413 - 4580

2168