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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003098.1_439_1088_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

439 - 1088

Intron Length:

650

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAT|GCATCCACC

5'SS Class:

weak_major

3'SS Sequence:

TTCTTGCAGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

CTCTCTTGAAGA

Flanking Amino Acid:

LGKGKMQPSACWCLQVAFTL

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.1

0.1

1.5

60.3

Major BPS

74.6

0.61

65.6

41.4

Major PPT

56.5

0.15

1.2

56.9

42.9

Minor 5ss

44.4

-0.6

3.8

65.6

38.9

Minor BPS

53.1

0.09

1.8

63.35

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016556

Chromosome:

PEDO01003098.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016813

326 - 1587

1262