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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003099.1_355_515_R

Intron Information:

Intron Rank:

130812

Intron Class:

major

Intron Phase:

Intron Coordinates:

355 - 515

Intron Length:

161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

GTCATTGTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

62.7

0.32

1.4

63.4

Major PPT

80.8

0.69

0.9

72.8

42.2

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

41.8

-0.6

2.1

50.54

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017616

Chromosome:

PEDO01003099.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046829

257 - 1275

1019

ENSAPLT00000041110

21 - 1275

1255