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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003130.1_1745_3059_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1745 - 3059

Intron Length:

1315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGCTGGGC

5'SS Class:

weak_major

3'SS Sequence:

AGGTGGACCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGTGGAC

U12 Branch Point Sequence:

TGCCCCGCAGGT

Flanking Amino Acid:

QGQWVEVGRAGEVIKSNLNP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.1

0.1

1.1

42.3

38.8

Major BPS

41.6

-0.5

1.5

34.5

43.7

Major PPT

53.5

0.08

1.1

44.1

41.8

Minor 5ss

22.7

-3.1

3.4

23.5

37.4

Minor BPS

37.2

-0.8

2.4

54.32

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020413

Chromosome:

PEDO01003130.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025019

1279 - 4699

3421