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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003130.1_3203_4642_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3203 - 4642

Intron Length:

1440

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCACCCCAT

5'SS Class:

weak_major

3'SS Sequence:

GCCCTCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCACCAT

U12 Branch Point Sequence:

GCTGCCACCATG

Flanking Amino Acid:

GTHRGWDRPRAPLAVLSKVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.8

0.14

1.4

47.8

47.7

Major BPS

46.3

-0.2

1.3

52.4

41.4

Major PPT

70.4

0.46

0.8

60.9

35.2

Minor 5ss

33.2

-1.9

4.3

46.8

48.6

Minor BPS

38.2

-1

2.1

40.83

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020413

Chromosome:

PEDO01003130.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025019

1279 - 4699

3421