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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003168.1_1376_1610_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1376 - 1610

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTCA

5'SS Class:

strong_major

3'SS Sequence:

CTCCATCTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

GGCTCCCTGATG

Flanking Amino Acid:

VLCLQGHTDQIFSLAWSPDG

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

73.6

0.53

0.8

64.7

36.1

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

49.2

-0.2

1.8

52.84

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017897

Chromosome:

PEDO01003168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019617

25 - 2562

2538

ENSAPLT00000019091

170 - 5100

4931