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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003168.1_515_588_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

515 - 588

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCGCTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CCCCGCTCACCT

Flanking Amino Acid:

NSFTSIDPHKGFVFLRKTAC

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

67.2

0.39

0.8

57.6

33.3

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

-0.6

2.1

52.75

48.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017897

Chromosome:

PEDO01003168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019091

170 - 5100

4931

ENSAPLT00000019617

25 - 2562

2538