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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003169.1_2027_2105_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2027 - 2105

Intron Length:
79

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGACGCCG

5'SS Class:
major

3'SS Sequence:
TTGGGGTGCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTAAT

U12 Branch Point Sequence:
AACCCATTAATA

Flanking Amino Acid:
TYEPLDEQLDSGLSYIKIFD

Intron Amino Acid Position:
20

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.7
0.44
1.2
54
44.7

Major BPS
79.4
0.73
0.9
79.6
29.1

Major PPT
60.1
0.23
1.1
53.4
45.8

Minor 5ss
31.2
-2.2
3.2
39.3
46.1

Minor BPS
56.1
0.19
1.6
61.97
37.8

Associated Gene:

Gene:
PFKFB1

Ensembl Gene ID:

Chromosome:
PEDO01003169.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1 - 2164
2164