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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003169.1_609_846_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
609 - 846

Intron Length:
238

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCG|GTCAGCGCC

5'SS Class:
major

3'SS Sequence:
GCCCACCCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAGTAAC

U12 Branch Point Sequence:
GACCCCAAAAGT

Flanking Amino Acid:
QWKALNEIDAGVCEEMTYEE

Intron Amino Acid Position:
139

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.1
0.33
1.4
58.5
42.1

Major BPS
57.9
0.2
1.1
59.4
34.8

Major PPT
61.9
0.27
0.9
53.1
30.8

Minor 5ss
33.5
-1.9
3.2
44
43.3

Minor BPS
42.2
-0.5
2.1
56.36
45.3

Associated Gene:

Gene:
PFKFB1

Ensembl Gene ID:

Chromosome:
PEDO01003169.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1 - 2164
2164