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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003169.1_994_1818_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
994 - 1818

Intron Length:
825

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGGGCGGG

5'SS Class:
major

3'SS Sequence:
CACCCTCTCCCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCCTCAC

U12 Branch Point Sequence:
GTGGCCTCACGT

Flanking Amino Acid:
DAGLSPRGRQYAQALAEFIR

Intron Amino Acid Position:
90

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.3
0.53
1.1
54
45.2

Major BPS
54.7
0.12
1.2
59.2
39.1

Major PPT
70.2
0.45
0.8
60.9
34.8

Minor 5ss
28.9
-2.4
3.5
37.3
47.4

Minor BPS
43.9
-0.3
2.1
60.43
48.7

Associated Gene:

Gene:
PFKFB1

Ensembl Gene ID:

Chromosome:
PEDO01003169.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1 - 2164
2164