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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003184.1_19839_20453_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

19839 - 20453

Intron Length:

615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

AATAATTTAAAA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

81.6

0.78

0.8

24.9

Major PPT

83.1

0.75

0.9

84.1

30.8

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

52.5

0.08

1.6

62.52

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014573

Chromosome:

PEDO01003184.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015178

19156 - 28402

9247