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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003208.1_5908_6221_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5908 - 6221

Intron Length:

314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTGGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

ACGACCTCAGCT

Flanking Amino Acid:

LPTREYPSEQIIVTEKTNIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.5

40.6

Major BPS

73.1

0.58

79.6

29.1

Major PPT

82.3

0.73

0.9

80.2

31.8

Minor 5ss

39.5

-1.2

50.7

39.9

Minor BPS

48.4

-0

1.8

63.59

46.2

Associated Gene:

Gene:

DDA1

Ensembl Gene ID:

ENSAPLG00000027911

Chromosome:

PEDO01003208.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020187

4756 - 7077

2322