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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003221.1_1068_1176_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1068 - 1176

Intron Length:
109

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGCGGATG

5'SS Class:
major

3'SS Sequence:
GCCCCGTTCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGGTGAC

U12 Branch Point Sequence:
GCCCTGGTGACA

Flanking Amino Acid:
LKYYLEKDWAGSRRHGHPLT

Intron Amino Acid Position:
110

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.2
0.64
1
69.7
42.4

Major BPS
56.2
0.15
1.3
48.8
46.3

Major PPT
66.2
0.37
0.9
56.2
38.8

Minor 5ss
29.4
-2.4
3.3
38.8
46.5

Minor BPS
37.3
-1
2.4
43.25
39.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01003221.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

383 - 1786
1404

506 - 1728
1223