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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003221.1_696_929_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

696 - 929

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCCGGTAGG

5'SS Class:

major

3'SS Sequence:

AGGGACACCAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

CTTGTAGGGACA

Flanking Amino Acid:

RLQDAFQGRYAALQWPETGR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.2

61.7

42.4

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

41.6

-0.4

1.6

32.4

35.6

Minor 5ss

-3.6

3.4

21.5

31.1

Minor BPS

38.1

-0.9

2.2

51.1

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015203

Chromosome:

PEDO01003221.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015855

506 - 1728

1223