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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003226.1_1931_2023_F

Intron Information:

Intron Rank:
5
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
1931 - 2023
Intron Length:
93

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTGAGGCCA
5'SS Class:
strong_major
3'SS Sequence:
TCCTGCCCCGCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTAGGAC
U12 Branch Point Sequence:
TCTGGTGGGAGC
Flanking Amino Acid:
KGSLRSMEKQIQELQERLAA
Intron Amino Acid Position:
150

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83.8
0.8
0.9
68.4
38.2
Major BPS
49.9
-0
1.4
51.4
43.9
Major PPT
71.9
0.49
0.8
65.3
30.5
Minor 5ss
25.6
-2.8
3
30.5
42.8
Minor BPS
31.9
-1.4
2.3
40.83
40.4

Associated Gene:

Gene:
ANKRD24
Ensembl Gene ID:
ENSAPLG00000020721
Chromosome:
PEDO01003226.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000021481
326 - 4802
4477
ENSAPLT00000033375
326 - 4802
4477
ENSAPLT00000027873
326 - 4802
4477
ENSAPLT00000023630
326 - 4802
4477