About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003226.1_2496_2576_F

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
2496 - 2576
Intron Length:
81

Sequence Information:

Terminal Dinucleotides:
GC-AG
5'SS Sequence:
CAG|GCAAGAACC
5'SS Class:
strong_major
3'SS Sequence:
ATCCCCTTGGCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCACCAT
U12 Branch Point Sequence:
CCGGCCTCACCA
Flanking Amino Acid:
QNKELREKIQVLENFERDES
Intron Amino Acid Position:
248

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
93.8
1.03
0.8
86.3
26.9
Major BPS
53
0.08
1.4
63
42.7
Major PPT
69.5
0.44
1
65.3
35.5
Minor 5ss
24.4
-2.9
3.7
35.3
40.9
Minor BPS
45.3
-0.3
1.9
50.56
47

Associated Gene:

Gene:
ANKRD24
Ensembl Gene ID:
ENSAPLG00000020721
Chromosome:
PEDO01003226.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000023630
326 - 4802
4477
ENSAPLT00000021481
326 - 4802
4477
ENSAPLT00000033375
326 - 4802
4477
ENSAPLT00000027873
326 - 4802
4477