About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003226.1_4419_4511_F


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4419 - 4511

Intron Length:
93

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGGGCAAA

5'SS Class:
major

3'SS Sequence:
TTCTCTGTCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGGTGAC

U12 Branch Point Sequence:
GTGACAGGACCC

Flanking Amino Acid:
YRSHLLYAVQGHMDEDVQRL

Intron Amino Acid Position:
705

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.9
0.63
1
70.2
37.7

Major BPS
47.5
-0.1
1.3
38.2
41.7

Major PPT
79.6
0.67
0.8
72.3
37.7

Minor 5ss
31.9
-2.1
3.1
38.5
46.8

Minor BPS
35.8
-1
2.3
46.01
42.2

Associated Gene:

Gene:
ANKRD24

Ensembl Gene ID:

Chromosome:
PEDO01003226.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

326 - 4802
4477

326 - 4802
4477