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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003228.1_180_601_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

180 - 601

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

TGCCCGGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TCTCCCTGACCC

Flanking Amino Acid:

IPAALGFGQQVSDTLLDCRK

Intron Amino Acid Position:

744

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

42.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

60.1

0.23

49.5

39.3

Minor 5ss

37.8

-1.4

46.8

48.5

Minor BPS

56.4

0.18

1.8

68.78

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009171

Chromosome:

PEDO01003228.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009550

12 - 15221

15210