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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003228.1_4733_5010_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4733 - 5010

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CACCCCTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTGCAT

U12 Branch Point Sequence:

TGCGGGGTAACT

Flanking Amino Acid:

RELRETVGDLEAMNEMNDEL

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

53.6

0.09

1.4

65.3

41.5

Major PPT

64.7

0.33

38.3

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

38.3

-0.8

2.8

59.57

49.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009171

Chromosome:

PEDO01003228.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009550

12 - 15221

15210