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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003228.1_5116_6034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5116 - 6034

Intron Length:

919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

TGTACTGTGATG

Flanking Amino Acid:

EKTVDELKEQVDAALGAEEM

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

76.7

33.9

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

0.59

65.9

45.3

Minor 5ss

29.1

-2.4

2.7

33.3

41.7

Minor BPS

46.5

-0.4

2.1

55.36

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009171

Chromosome:

PEDO01003228.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009550

12 - 15221

15210