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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003232.1_1154_1282_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1154 - 1282

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCGAG

5'SS Class:

major

3'SS Sequence:

CGCCGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAA

U12 Branch Point Sequence:

CCCCCCCTGACA

Flanking Amino Acid:

SFLYLAGVLAGSLTVSITDM

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

59.3

41.8

Major BPS

48.4

-0.1

1.2

56.4

39.5

Major PPT

64.9

0.34

56.8

38.7

Minor 5ss

28.8

-2.4

3.5

36.3

48.1

Minor BPS

49.3

-0

1.7

56.51

42.8

Associated Gene:

Gene:

RHBDL1

Ensembl Gene ID:

ENSAPLG00000029264

Chromosome:

PEDO01003232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026444

3 - 1962

1960