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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003232.1_1656_1878_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1656 - 1878

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCTCGGCGG

5'SS Class:

weak_major

3'SS Sequence:

TGGTTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTGAC

U12 Branch Point Sequence:

GGGGAGGTGACA

Flanking Amino Acid:

MAAVTLTQVGIIVFLCYGAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.5

0.18

1.4

43.2

43.9

Major BPS

48.9

-0

1.3

40.5

41.4

Major PPT

72.5

0.51

0.9

66.4

35.7

Minor 5ss

14.7

-4.1

3.5

13.4

28.2

Minor BPS

33.7

-1.2

2.5

40.23

Associated Gene:

Gene:

RHBDL1

Ensembl Gene ID:

ENSAPLG00000029264

Chromosome:

PEDO01003232.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026444

3 - 1962

1960