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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003247.1_1204_2055_R

Intron Information:

Intron Rank:

154535

Intron Class:

major

Intron Phase:

Intron Coordinates:

1204 - 2055

Intron Length:

852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CATTTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

TGTCCATAGAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

83.5

0.75

0.8

77.4

30.9

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

43.6

-0.5

2.1

57.98

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030694

Chromosome:

PEDO01003247.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022010

21 - 2309

2289