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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003249.1_2111_2610_R

Intron Information:

Intron Rank:

136845

Intron Class:

major

Intron Phase:

Intron Coordinates:

2111 - 2610

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

AATATCTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.8

38.5

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

89.9

0.9

0.6

83.9

31.1

Minor 5ss

38.8

-1.3

3.4

58.1

46.5

Minor BPS

60.1

0.4

1.4

73.25

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021119

Chromosome:

PEDO01003249.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041642

1708 - 3382

1675