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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003282.1_6564_6641_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6564 - 6641

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGGCA

5'SS Class:

major

3'SS Sequence:

TTGGTGCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

AGGGCACTCACT

Flanking Amino Acid:

LEPHGRDFETWTDTVFLVAR

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

64.5

Major BPS

64.9

0.37

29.8

Major PPT

72.6

0.51

62.6

44.3

Minor 5ss

24.2

-3

3.2

26.5

Minor BPS

40.5

-0.6

2.2

57.03

Associated Gene:

Gene:

PATL2

Ensembl Gene ID:

ENSAPLG00000003980

Chromosome:

PEDO01003282.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004074

6410 - 8828

2419