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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003284.1_3504_4672_F

Intron Information:

Intron Rank:

130825

Intron Class:

major

Intron Phase:

Intron Coordinates:

3504 - 4672

Intron Length:

1169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCAGCAC

U12 Branch Point Sequence:

CCCTCCAGCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

41.5

-0.5

1.3

37.8

Major PPT

88.2

0.86

0.7

80.6

31.5

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

43.4

-0.5

2.1

51.55

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020228

Chromosome:

PEDO01003284.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046596

2818 - 4989

2172