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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003293.1_669_1631_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

669 - 1631

Intron Length:

963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAA

U12 Branch Point Sequence:

TTTTTTTTTATA

Flanking Amino Acid:

HWSYSINYLHWGEPKTWYGV

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

60.5

44.3

Major BPS

56.6

0.16

1.2

49.3

Major PPT

94.7

1.01

0.5

91.9

19.2

Minor 5ss

28.8

-2.4

3.5

34.5

43.8

Minor BPS

66.5

0.51

1.5

77.98

32.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025280

Chromosome:

PEDO01003293.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041898

224 - 3060

2837