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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003294.1_495_539_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

495 - 539

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGGTG

5'SS Class:

major

3'SS Sequence:

CCTGCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGGT

U12 Branch Point Sequence:

GCCCCCTCGCCT

Flanking Amino Acid:

VPPSKAVGFEQSTLPEGRPA

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

60.8

43.9

Major BPS

33.1

-1

4.2

57.3

41.7

Major PPT

0.41

0.8

57.9

33.2

Minor 5ss

31.8

-2.1

3.8

46.5

48.8

Minor BPS

37.3

-0.9

3.4

57.59

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029761

Chromosome:

PEDO01003294.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033309

222 - 3938

3717