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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003309.1_339_571_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

339 - 571

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTCTTTTTA

5'SS Class:

weak_major

3'SS Sequence:

CCCCCCCCAGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

CCCCCCTTAACC

Flanking Amino Acid:

FIDVLGFLSREDIGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.3

0.13

1.4

60.5

40.9

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

46.9

-0.1

1.6

50.7

26.2

Minor 5ss

44.9

-0.5

2.5

46.2

Minor BPS

69.2

0.59

1.4

67.59

44.2

Associated Gene:

Gene:

ATP6V1F

Ensembl Gene ID:

ENSAPLG00000017127

Chromosome:

PEDO01003309.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024608

140 - 588

449