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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003400.1_1562_1647_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1562 - 1647

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAC

U12 Branch Point Sequence:

CAGTCATTAACC

Flanking Amino Acid:

CKAQPCVFSAGRSSPREPPH

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

69.5

0.49

71.3

30.3

Major PPT

0.41

0.8

58.1

33.2

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

64.7

0.44

1.7

68.83

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027124

Chromosome:

PEDO01003400.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044529

21 - 2633

2613