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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003458.1_2325_2539_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2325 - 2539

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCTGAGATT

5'SS Class:

weak_major

3'SS Sequence:

AGCCCCCCCGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TGATTTTGCACT

Flanking Amino Acid:

CQPTEGEPPGEEVGGSSKTS

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.6

0.02

1.4

62.4

42.1

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

46.3

-0.2

1.6

46.9

30.3

Minor 5ss

21.8

-3.3

4.1

31.6

42.7

Minor BPS

48.9

-0

1.9

69.88

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015408

Chromosome:

PEDO01003458.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016053

2202 - 4712

2511