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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003458.1_2678_2761_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2678 - 2761

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCCGTGAGT

5'SS Class:

weak_major

3'SS Sequence:

TGCCCCCACCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TCCCATTTATAT

Flanking Amino Acid:

VTEFLTYNCLTDTDLYSECL

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.4

0.08

1.3

56.3

40.7

Major BPS

79.2

0.73

75.3

39.4

Major PPT

63.7

0.31

0.9

54.5

35.5

Minor 5ss

17.9

-3.7

3.8

28.4

38.1

Minor BPS

45.2

-0.2

1.8

59.22

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015408

Chromosome:

PEDO01003458.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016053

2202 - 4712

2511