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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003467.1_704_1053_F

Intron Information:

Intron Rank:

132696

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

704 - 1053

Intron Length:

350

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

CTG|GTGGCTCCC

5'SS Class:

weak_major

3'SS Sequence:

TATTTGGGGTCTG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGGGAT

U12 Branch Point Sequence:

CATGGGTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.2

0.19

1.2

49.4

41.6

Major BPS

56.3

0.16

1.6

57.1

49.4

Major PPT

37.3

-0.7

3.2

54.1

49.5

Minor 5ss

34.3

-1.8

3.1

41.7

Minor BPS

39.2

-0.7

2.5

55.93

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021317

Chromosome:

PEDO01003467.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025443

21 - 1180

1160