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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003490.1_1912_2322_R

Intron Information:

Intron Rank:

147361

Intron Class:

major

Intron Phase:

Intron Coordinates:

1912 - 2322

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

ACATCCCCACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

0.41

0.8

58.1

33.2

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

45.7

-0.2

2.1

64.45

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026618

Chromosome:

PEDO01003490.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040929

1633 - 2971

1339