Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003491.1_2345_2445_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2345 - 2445

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGAGCG

5'SS Class:

major

3'SS Sequence:

TGTCCCCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAC

U12 Branch Point Sequence:

ACCCCCCCAAAT

Flanking Amino Acid:

ASMFAYDQYEGSTENLFTWN

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

59.5

39.8

Major BPS

66.1

0.4

1.2

69.1

37.9

Major PPT

61.1

0.25

60.1

30.1

Minor 5ss

23.9

-3

3.3

29.6

43.4

Minor BPS

44.3

-0.3

1.9

58.5

43.8

Associated Gene:

Gene:

GANAB

Ensembl Gene ID:

ENSAPLG00000025733

Chromosome:

PEDO01003491.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040434

184 - 3473

3290

ENSAPLT00000034638

294 - 3473

3180

ENSAPLT00000033068

294 - 3473

3180