Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003518.1_103521_104614_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

103521 - 104614

Intron Length:

1094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTTGTC

5'SS Class:

major

3'SS Sequence:

CTCCCCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAGAT

U12 Branch Point Sequence:

GGTTTAAGATTC

Flanking Amino Acid:

GREMRDYSFKDFDFSNENTD

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

72.5

37.5

Major BPS

67.4

0.43

1.1

63.4

42.8

Major PPT

75.2

0.57

0.8

65.5

30.4

Minor 5ss

35.9

-1.6

3.5

52.1

45.1

Minor BPS

-0.9

1.9

46.91

35.4

Associated Gene:

Gene:

TTC25

Ensembl Gene ID:

ENSAPLG00000001436

Chromosome:

PEDO01003518.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001444

93156 - 104781

11626