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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003518.1_24856_25143_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24856 - 25143

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CATCCCCCGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TGTCCCTCATCC

Flanking Amino Acid:

MIPINEPYSDELDPGYRPMY

Intron Amino Acid Position:

685

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

77.1

Major BPS

0.5

1.1

71.2

35.2

Major PPT

63.9

0.31

58.5

32.6

Minor 5ss

31.1

-2.2

2.6

35.6

40.5

Minor BPS

55.5

0.15

1.9

69.5

41.3

Associated Gene:

Gene:

JUP

Ensembl Gene ID:

ENSAPLG00000014851

Chromosome:

PEDO01003518.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015520

24710 - 34374

9665