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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003518.1_26138_26287_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26138 - 26287

Intron Length:

150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TGTCCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GCTGGCTGAGCG

Flanking Amino Acid:

VAAGTQQPYTDGVKMEEIVE

Intron Amino Acid Position:

541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

75.8

0.58

0.8

69.4

31.1

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

41.2

-0.8

2.1

44.66

Associated Gene:

Gene:

JUP

Ensembl Gene ID:

ENSAPLG00000014851

Chromosome:

PEDO01003518.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015520

24710 - 34374

9665