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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003518.1_26444_26840_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26444 - 26840

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGGGGT

5'SS Class:

major

3'SS Sequence:

GTCCCTTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

TTTGACGAATTT

Flanking Amino Acid:

NQPNQWPLVKATIGLIRNLA

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

65.6

40.1

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

77.9

0.63

0.8

37.1

Minor 5ss

31.6

-2.1

3.6

46.4

Minor BPS

39.2

-0.7

2.5

46.8

Associated Gene:

Gene:

JUP

Ensembl Gene ID:

ENSAPLG00000014851

Chromosome:

PEDO01003518.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015520

24710 - 34374

9665