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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003518.1_33118_34151_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33118 - 34151

Intron Length:

1034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

CAGCCTTTGACG

Flanking Amino Acid:

GGGQSQSQAQADMEAQLAMT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

75.5

34.4

Major BPS

74.1

0.6

66.7

39.9

Major PPT

86.2

0.81

0.7

80.7

24.5

Minor 5ss

32.4

-2

3.9

48.7

47.8

Minor BPS

54.5

-0

1.4

52.4

42.7

Associated Gene:

Gene:

JUP

Ensembl Gene ID:

ENSAPLG00000014851

Chromosome:

PEDO01003518.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015520

24710 - 34374

9665