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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003518.1_53646_53940_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53646 - 53940

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CGGTTCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTGAG

U12 Branch Point Sequence:

GTGAGCCGAGCC

Flanking Amino Acid:

LVDLEAQPYEPIFVRSVKLY

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

43.4

-0.4

1.6

34.6

43.7

Major PPT

73.3

0.52

0.9

66.1

35.8

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

36.8

-1

2.1

45.88

42.1

Associated Gene:

Gene:

P3H4

Ensembl Gene ID:

ENSAPLG00000015731

Chromosome:

PEDO01003518.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016391

51658 - 56225

4568