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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003518.1_5980_6090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5980 - 6090

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCACGG

5'SS Class:

major

3'SS Sequence:

TTTGTCCCAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TGGCTCTGACCC

Flanking Amino Acid:

ISRFLPHMFAELRDRKGFVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.3

48.4

47.8

Major BPS

69.1

0.47

60.7

37.6

Major PPT

75.9

0.58

0.9

71.6

34.2

Minor 5ss

35.8

-1.6

3.3

48.5

47.1

Minor BPS

47.6

-0.2

1.7

57.12

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023688

Chromosome:

PEDO01003518.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024350

5342 - 6299

958