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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003518.1_64973_65219_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

64973 - 65219

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GGCCTCACGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

GTGGCCTCACGG

Flanking Amino Acid:

ILKIGFLNDKVEERRGKYLD

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

0.16

51.1

Minor 5ss

29.5

-2.4

3.4

39.1

46.7

Minor BPS

-0.8

2.1

43.77

47.7

Associated Gene:

Gene:

NT5C3B

Ensembl Gene ID:

ENSAPLG00000015879

Chromosome:

PEDO01003518.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016568

64862 - 66889

2028