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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003519.1_107_315_R

Intron Information:

Intron Rank:

154730

Intron Class:

major

Intron Phase:

Intron Coordinates:

107 - 315

Intron Length:

209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCCGGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTGCAC

U12 Branch Point Sequence:

TTTTCCCCCCTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

76.1

33.6

Major BPS

-0.4

1.5

48.8

46.3

Major PPT

65.6

0.35

0.9

62.2

28.7

Minor 5ss

32.3

-2

3.3

44.3

43.6

Minor BPS

-1.1

3.7

63.04

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030823

Chromosome:

PEDO01003519.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029631

21 - 1439

1419