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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003519.1_646_1061_F

Intron Information:

Intron Rank:

139272

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

646 - 1061

Intron Length:

416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGCGCGCC

5'SS Class:

major

3'SS Sequence:

GCTGGTGAACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

TGCTGGTGAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.1

51.7

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

52.8

0.06

1.1

43.7

45.8

Minor 5ss

31.6

-2.1

3.5

42.2

44.8

Minor BPS

44.7

-0.4

2.5

59.68

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024981

Chromosome:

PEDO01003519.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025579

21 - 1439

1419