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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003535.1_5262_5957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5262 - 5957

Intron Length:

696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGCGCC

5'SS Class:

major

3'SS Sequence:

TGCTGCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CGCTGCTGATCG

Flanking Amino Acid:

ADPVDVNPFQDPSVTQLTST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

60.4

39.1

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

71.7

0.49

0.9

65.3

36.2

Minor 5ss

31.1

-2.2

3.4

41.9

45.1

Minor BPS

42.3

-0.7

2.1

44.48

47.2

Associated Gene:

Gene:

SCAMP2

Ensembl Gene ID:

ENSAPLG00000011321

Chromosome:

PEDO01003535.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037170

5205 - 9106

3902