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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003535.1_6888_7133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6888 - 7133

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

CCCCGTCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

GGGCTCACAGCT

Flanking Amino Acid:

ICKMLYYLWMLHSVTLLLNL

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.3

38.4

Major BPS

52.1

0.05

1.3

41.8

Major PPT

67.4

0.39

0.8

60.5

29.4

Minor 5ss

32.9

-2

2.8

37.8

40.1

Minor BPS

-0.6

1.8

52.42

41.6

Associated Gene:

Gene:

SCAMP2

Ensembl Gene ID:

ENSAPLG00000011321

Chromosome:

PEDO01003535.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037170

5205 - 9106

3902

ENSAPLT00000011796

5632 - 9106

3475