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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003536.1_4462_4575_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4462 - 4575

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCCCCG

5'SS Class:

weak_major

3'SS Sequence:

AGACATCTACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGACAT

U12 Branch Point Sequence:

AGACATCTACCA

Flanking Amino Acid:

FPSPGQEIYQVPPSLDSRSW

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.2

44.3

45.1

Major BPS

0.03

1.1

58.7

38.1

Major PPT

58.2

0.19

1.1

48.5

43.9

Minor 5ss

37.2

-1.4

3.2

48.5

47.2

Minor BPS

40.1

-0.7

1.9

46.96

35.6

Associated Gene:

Gene:

BCAR1

Ensembl Gene ID:

ENSAPLG00000015063

Chromosome:

PEDO01003536.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015696

21 - 5490

5470