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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003560.1_1250_1373_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

1250 - 1373

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

AT-AG

5'SS Sequence:

AAG|ATATCCTTG

5'SS Class:

strong_minor

3'SS Sequence:

ACTTCGTGCCCAG|G

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TTTCCCTGACTT

Flanking Amino Acid:

GLLILVLVLKALDLWMQLNK

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

37.5

-0.7

3.5

53.2

46.3

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

66.2

0.36

57.5

42.7

Minor 5ss

89.2

1.3

90.9

28.7

Minor BPS

61.8

0.45

1.8

82.5

38.8

Associated Gene:

Gene:

GPAA1

Ensembl Gene ID:

ENSAPLG00000023434

Chromosome:

PEDO01003560.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018465

21 - 3566

3546