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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01003560.1_1994_2148_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1994 - 2148

Intron Length:

155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGCCG

5'SS Class:

major

3'SS Sequence:

ACGTGGTCACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAG

U12 Branch Point Sequence:

TGGAGCTGAGCA

Flanking Amino Acid:

AGGLPRRQRHRFDVALEGLN

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.3

46.2

Major BPS

47.4

-0.1

1.5

42.8

41.8

Major PPT

57.5

0.17

1.1

47.8

44.4

Minor 5ss

31.6

-2.1

3.3

40.9

44.9

Minor BPS

43.5

-0.4

2.1

54.03

Associated Gene:

Gene:

GPAA1

Ensembl Gene ID:

ENSAPLG00000023434

Chromosome:

PEDO01003560.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018465

21 - 3566

3546